BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB033C06LP1|AL429710
(908 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1770 1746 0.0
>3x_Contig1770
Length = 29267
Score = 1746 bits (881), Expect = 0.0
Identities = 904/909 (99%), Gaps = 2/909 (0%)
Strand = Plus / Plus
Query: 1 acaatttatgcgatttcaatgcttggtataattcatctttggttactgaccaattggagc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 27320 acaatttatgcgatttcaatgcttggtataattcatctttggttactgaccaattggagc 27379
Query: 61 gtcgtcggatcaaatgttcgtacaacgtatctatcagcatatcttcggcagccggttctt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 27380 gtcgtcggatcaaatgttcgtacaacgtatctatcagcatatcttcggcagccggttctt 27439
Query: 121 ccttccaccaacggaccacttcatcgcagagctgggttcggctaggagtgatcaagctgg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 27440 ccttccaccaacggaccacttcatcgcagagctgggttcggctaggagtgatcaagctgg 27499
Query: 181 acccggtgctctgatcttcatcgttcaaccgaagtgtctctagcttcaaatgaaccatca 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 27500 acccggtgctctgatcttcatcgttcaaccgaagtgtctctagcttcaaatgaaccatca 27559
Query: 241 cttcaggccaaggaaattaacaggggaattatggttgtggatttactagtattgttagat 300
|||||||||||||||||||||||||||||| | |||||||||||||||||||||||||||
Sbjct: 27560 cttcaggccaaggaaattaacaggggaatttttgttgtggatttactagtattgttagat 27619
Query: 301 gctcctacagagttttcctagcagcggggggctagatccctctttgccacttctctatct 360
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 27620 gctcctacagagttttcctagcagcggggg-ctagatccctctttgccacttctctatct 27678
Query: 361 ccatctttcattcgctccacagtaagcatgaaaagctaaacagaatttaaaggattctta 420
|||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 27679 ccatctttcattcgctccacagtaagaatgaaaagctaaacagaatttaaaggattctta 27738
Query: 421 actagacaaacctttaaaccaatgactatactccgttcatgagagaagcacatctataag 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 27739 actagacaaacctttaaaccaatgactatactccgttcatgagagaagcacatctataag 27798
Query: 481 ggcgtatataagacttaaaacacctgcaagaaaacgagaaacagatgttcagaattatta 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 27799 ggcgtatataagacttaaaacacctgcaagaaaacgagaaacagatgttcagaattatta 27858
Query: 541 gagatccgctgttaaggaacactatccgtagg-cttctacggacgctacaagtgagagca 599
|||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 27859 gagatccgctgttaaggaacactatccgtagggcttctacggacgctacaagtgagagca 27918
Query: 600 ttgctgcagcagcaagacaagccaaattcgttgtaaagaaaccctcatcgaaccggaaat 659
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 27919 ttgctgcagcagcaagacaagccaaattcgttgtaaagaaaccctcatcgaaccggaaat 27978
Query: 660 ggaccaatgtgctgatcttcggtacatgtttcgggataggttggtttacaacacaacatc 719
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 27979 ggaccaatgtgctgatcttcggtacatgtttcgggataggttggtttacaacacaacatc 28038
Query: 720 tgacacttactgatatcatggcatggtggttctacgggaagttaccggataccgactcca 779
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 28039 tgacacttactgatatcatggcatggtggttctacgggaagttaccggataccgactcca 28098
Query: 780 agctaatcgattacagagatgagttaaaccaaagatgtgacaatttatcgatagtgaagc 839
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 28099 agctaatcgattacagagatgagttaaaccaaagatgtgacaatttatcgatagtgaagc 28158
Query: 840 agcttctctccaaggggtacgttgccgtgtacaagcagccggacgcagacgcgacgaata 899
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 28159 agcttctctccaaggggtacgttgccgtgtacaagcagccggacgcagacgcgacgaata 28218
Query: 900 cgttgattg 908
|||||||||
Sbjct: 28219 cgttgattg 28227
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5096
Number of Sequences: 1807
Number of extensions: 5096
Number of successful extensions: 29
Number of sequences better than 1.0e-20: 1
length of query: 908
length of database: 10,358,551
effective HSP length: 16
effective length of query: 892
effective length of database: 10,329,639
effective search space: 9214037988
effective search space used: 9214037988
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 50 (99.6 bits)